Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSDTSPNGLSRREELLAVATKLFAARGYHGTRMDDVADVIGLNKATVYHYYASKSLILFDIYRQAAEGTLAAVHD-----DPSWTAREALYQYTVRLLTAIASNPERAAVYFQEQ-PYIT------EWFTSEQVAEVREKEQQVYEHVHGLIDRGIASGEFYECDSHVVALGYIGMTLGSYRWLRPSGRRTAKEIAAEFSTALLRGLIRDESIRNQSPLGTRKET |
| 3VPR Chain:A ((5-187)) | ------------RDRILEEAAKLFTEKGYEATSVQDLAQALGLSKAALYHHFGSKEEILYEISLLALKGLVAAGEKALEVADP----KEALRRFM-----------EAHARYFEENYPFFVTMLQGIKSLSPENRLKTIALRDRHEENLRAILRRGVEQGVFREVDVALAGRAVLSMLNWMIRWFRPDGPMRAEEVARAYHDLILRGLER---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VPR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34224 for 1126 contacts (-30.4/contact) +
2D Compatibility (PS) -17781 + (NN) -3538 + (LL) 1696
1D Compatibility (HY) 0 + (ID) 1700
Total energy: -55547.0 ( -49.33 by residue)
QMean score : 0.339
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