Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVVVEKTPTTLPQATPNGAAPWHVRAGAFAIDVLPGLAVAATMALTALTVPPGSAWRWLCACLLGLTILLLAVNRLLLPTITGWSLGRALTGIRVVRRDGSAIGPWRLLVRDLAHLVDTLSLFVGWLWPLWDSRRRTFADLLLRTEVRRVEPVQRPAVIRRLTAAVALAAAGACASATAVGAAVVYVNEWQTDHTRAQLATRGP--KLVVDVLSYDPETVQRDFERARSLATDRYRPQLSIQQDSVRESGPVRNQYWVTDSAVLSATPAQATMLLFMQGERGTPPNQRYIQSTVRAIFQKSRGQWRLDDLAVVMKPRQPTGEK |
| 1V53 Chain:A ((149-196)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RGPGENEVVDTLAYTREEIERIIEKAFQLAQIRRKKLASVDKANVLES-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V53.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7191 for 171 contacts (42.1/contact) +
2D Compatibility (PS) -5047 + (NN) -1652 + (LL) 22168
1D Compatibility (HY) -2000 + (ID) 950
Total energy: 19710.0 ( 115.26 by residue)
QMean score : 0.498
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