Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWIRAERVAVLTPTASLRRLTACYAALAVCAALACTTGQPAARAADGREMLAQAIATTRGSYLVYNFGGGHPMPLLNAGGHWYEMNNGGHLMIIKNASQRLSPHLLVDTHTGD---QARCEHNPGARTGEGL------WQASEIYPPLKAWQRMGRPTIAVNANFFDVRGQKGGSWRSTGCSSPLGAYVDNTRGQGRANQAVTGTVAYAGKQGLSGGNELWSSLTTMILPVGGAPYVLRPKSRQDYDLATPVIEDLLNKNARFVAVAGIGLLSPGNTGQLHDGGPSAARTALAYAKQKDEMYIFQGGNYTPDNIQDLFRGLGSDTAILLDGGGSSAIVLRRDTGGMWAGAGSPKGSCDTRQVLCDSHERALPSWLAFN |
| 4BLV Chain:A ((8-81)) | ---------------------------------------------------------------------------FHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEH--AERTGEYLEGIARIWQQDDLPAELEAY----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BLV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3188 for 299 contacts (-10.7/contact) +
2D Compatibility (PS) -6588 + (NN) -1817 + (LL) 14788
1D Compatibility (HY) -2800 + (ID) 1150
Total energy: -755.0 ( -2.53 by residue)
QMean score : -0.096
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