Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAAHGYTQQKDNYAKRLRRVEGQVRGIARMIEEDKYCIDVLTQISAVTSALRSVALNLLDEHLSHCVTRAVAEGGPGADGKLAEASAAIARLVRS
4UIG Chain:A ((45-135))
----HGYHKQKAEHLKRLRRIEGQIRGLQRMVDEDVYCIDILTQVSASTKALQSFALQLLEEHLRHCVADAALKGGTEIDAKVEEATKAIGRLLR-
General information:
TITO was launched using:
RESULT:
Template:
4UIG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19323 for 476 contacts (-40.6/contact) +
2D Compatibility (PS) -9708 + (NN) -1898 + (LL) 520
1D Compatibility (HY) -8800 + (ID) 2700
Total energy: -41909.0 ( -88.04 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_4UIG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UIG-query.scw
PDB file :
Tito_Scwrl_4UIG.pdb
: