Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPELNTARGPIDTADLGVTLMHEHVFIMTTEIAQNYPEAWGDEDKRVAGAIARLGELKARGVDTIVDLTVIGLGRYIPRIARVAAATELNIVVATGLYTYNDVPFYFHYLGPGAQLDGPEIMTDMFVRDIEHGIADTGIKAGILKCATDEPGLTPGVERVLRAVAQAHKRTGAPISTHTHAGLRRGLDQQRIFAEEGVDLSRVVIGHCGDSTDVGYLEELIAAGSYLGMDRFGVDVIS--------------PFQDRVNIVARMCERGHADKMVLSHDACCYFDALPEELVPVA---MPNWHYLHIHNDVIPALKQHGVTDEQLHTMLVDNPRRIFERQGGYQ |
| 2D2H Chain:A ((5-327)) | ---INTVRGPIPVSEAGFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRHARAAGVQTIVDVSTFDIGRDVRLLAEVSRAADVHIVAATGLWF--DPPLSM-------RMRSVEELTQFFLREIQHGIEDTGIRAGIIKVATTGKA-TPFQELVLKAAARASLATGVPVTTHTSASQRDGEQQAAIFESEGLSPSRVCIGHSDDTDDLSYLTGLAARGYLVGLDRMPYSAIGLEGNASALALFGTRSWQTRALLIKALIDRGYKDRILVSHDWLFGFSSYVTNIMDVMDRINPD-GMAFVPLRVIPFLREKGVPPETLAGVTVANPARFLS------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2D2H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -246061 for 2809 contacts (-87.6/contact) +
2D Compatibility (PS) -32647 + (NN) -9178 + (LL) 576
1D Compatibility (HY) -23200 + (ID) 5850
Total energy: -316360.0 ( -112.62 by residue)
QMean score : 0.597
|
|
|