Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSTNNLTPSSLREAFGHFPTGVVAIAAEVDGVRQGLAASTFVPVSLEPPLVSFCVQNTSTTWPKLTGVPMLGISVLGEAHDAAVRTLAAKTGDRFAGLETVSNDAGAVFIKGTSVWLESAIEQLVPAGDHTIVVLRVNQVKVDPNVAPIVFHRSVLRRLGV
3PFT Chain:A ((1-156))
-----DLSPTSLREAFGHFPSGVIAIAAEVDGTRVGLAASTFVPVSLEPPLVAFAVQNSSTTWPKLKDLPSLGISVLGEAHDTAARTLAAKTGDRFAGLETESRDSGAVFINGTSVWLESAIEQLVPAGDHTIVVLRVSDIVINEAVPPIVFHRSAFRKLG-
General information:
TITO was launched using:
RESULT:
Template:
3PFT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113246 for 1146 contacts (-98.8/contact) +
2D Compatibility (PS) -17219 + (NN) -7764 + (LL) 264
1D Compatibility (HY) -17200 + (ID) 6200
Total energy: -161365.0 ( -140.81 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_3PFT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PFT-query.scw
PDB file :
Tito_Scwrl_3PFT.pdb
: