Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIELSYAPDVAGRRSNWPKGSGVNTWTAIRWTFAEDSPYVGTG-------LERMAS---DTHGGGGGRPVTPPPPGMHHLGCSRGVLLISSQRDAGHKT-CDPAAGGTLTSVLT
1Y75 Chain:B ((19-90))
------------------------------WDFADYGCYCGSGSGSPVDDLDRCCQVHDNCYNAGGGVTGCAPKSKTYTYECSQGTLTCSGENSACAATVCD------------
General information:
TITO was launched using:
RESULT:
Template:
1Y75.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4794 for 304 contacts (15.8/contact) +
2D Compatibility (PS) -6465 + (NN) -6423 + (LL) 1944
1D Compatibility (HY) -2800 + (ID) 1050
Total energy: -10000.0 ( -32.89 by residue)
QMean score : -0.181
(partial model without unconserved sides chains):
PDB file :
Tito_1Y75.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y75-query.scw
PDB file :
Tito_Scwrl_1Y75.pdb
: