Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATIHPPAYLLDQAKRRFTPSFNNFPGMSLVEHMLLNTKFPEKKLAEPPPGSGLKPVVGDAGLPILGHMIEMLRGGPDYLMFLYKTKGPV----VFGDSAVLPGVAALGPDAAQVIYSNRNKDYSQQGWV----PVIGPFFHRGLMLLDFEEHMFHRRIMQEAFVRSRLAGYLEQMDRVVSRVVADDWVVNDARFLVYPAMKALTLDIASMVFMGHEPGTDHELV----TKVNKAFTITTRAGNAVIRTSVPPFTWWRGLRARELLENYFTARVKERREA--SGNDLLTVLCQTEDDDGNRFSDADIVNHMIFLMMAAHDTSTSTATTMAYQLAAHPEWQQRCRDESDR-HGDGPLDIESLEQLESLDLVMNESIRLVTPVQWAMRQTVRDTELLGYYLPKGTNVIAYPGMNHRLPEIWTDPLTFDPERFTEPRNEHKRHRYAFTPFGGGVHKCIGMVFDQLEIKTILHRLLRRYRLELSRPDYQPRWDYSAMPIPMDGMPIVLRPR |
| 2VE4 Chain:A ((16-412)) | ----------------------------------------------------------GDFGLPWLGETLNFLNDG-DFGKKRQQQFGPIFKTRLFGKNVIFIS----GALANRFLFTKEQETF-QATWPLSTRILLGP---NALATQMGEIHRSRRKILYQAFLPRTLDSYLPKMDGIVQGYLEQWGKANEV--IWYPQLRRMTFDVAATLFMGEKVSQNPQLFPWFETYIQGLFSLPIPLPNTLFGKSQ---------RARALLLAELEKIIKARQQQPPSEEDALGILLAARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQELTAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQF-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VE4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175295 for 2935 contacts (-59.7/contact) +
2D Compatibility (PS) -41596 + (NN) -23352 + (LL) 5864
1D Compatibility (HY) -26800 + (ID) 5750
Total energy: -266929.0 ( -90.95 by residue)
QMean score : 0.339
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