Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADGARLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVTPDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTGCAEWSTGQGPLNSTAECSGEICRRQAGGHQVDATDPCCAERRQG |
4XCI Chain:B ((31-123)) | ----------------------------KEALRANIAAVKAIEEALKSTYGPRGMD----KMLVDSL----------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XCI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 226 for 124 contacts (1.8/contact) +
2D Compatibility (PS) -3554 + (NN) -340 + (LL) 1260
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -6308.0 ( -50.87 by residue)
QMean score : -0.067
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