Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRNLFALTPMALALCTASAAWADEGEAKEGFIEGSSLQLLTRNYYFNHDRRHASGHDSKEWAQGFIATFQSGYTPGVVGFGVDAYGMLGLKLDGGGGTGGTSILPITSPSKEGYESGKAPDEFSSGGAALKIRAFDTELKLGDQFLSNPVVAGGESRMLPQTFRGVSLTNNSFEDLTLTAGQVSFTKYYNQSGHRRLGSYYGELPGDRDSHHLSWLGGTWGGIEGFTSSLYAAELQNVWKQYYADVDYTYEIDDNWSLNPGAHYYKTVDSGDSLLGRIDNNTYSLHFAVGYRQHTVTAVLQKVNGNTPFDYIN----QGDSIFLDNSQQYSDFNGPNEKSWKLQYDYDFVALGLPGLSASASYSRGK-LDLTRVDPDSPGYGGWYSADGKNAKHWERDLDLQYVVQGGPAKDLSLRLRWATHRGTGGYSAVDNDIDEYRVIVDYPIDVF |
| 3SY7 Chain:A ((5-420)) | ---------------------SDQAEAK-GFIEDSSLDLLLRNYYFNRD-------DRVDWTQGFLTTYESGFTQGTVGFGVDAFGYLGLKLDGT-------------------------DDYSRAGGAVKVRISKTMLKWGEMQPTAPVFAAGGSRLFPQTATGVQLQSSEFEGLDLEAGH--FTE-----------ELYATYAGET-AKSADFIGGRYAITDNLSASLYGAELEDIYRQYYLNSNYTIPLASDQSLGFDFNIYRTNDEGKAKAGDISNTTWSLAAAYTLDAHTFTLAYQKVHGDQPFDYIGFGGAGGDSIFLANSVQYSDFNGPGEKSWQARYDLNLASYGVPGLTFMVRYINGKDIDGTKMSDNNVGYKNY--GYGEDGKHHETNLEAKYVVQSGPAKDLSFRIRQAWHRANA--DQGEGDQNEFRLIVDYPLSIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 29155 for 2997 contacts (9.7/contact) +
2D Compatibility (PS) -39377 + (NN) -10671 + (LL) 2712
1D Compatibility (HY) -30800 + (ID) 8850
Total energy: -57831.0 ( -19.30 by residue)
QMean score : 0.205
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