Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRTLATVMLAGGLLAAGQAVAEDHDMTPTHETDSGPLLWHNESLTYLYGKNFKINPPIQQTFTLEHAS--GWTWGDLFIFFDQ-INYNGKEDASNGKNTYYGEITPRLSFGKLTGADLSFGPVKDVLLAGTYEF-----GEGDTEAYLLGPGFDLAIPGFDYFQLNFYYRKPDGNRVRAGAWQITPVWSYTIPVGNSDILIDGYMDWVINNKSASTSRRNQSDYHANLHFNPQVKYDLGKALGYEPKHLYVGLEYDYWSDKYGVKDSQYFTTDQNTASFLVKYHF |
| 1TLY Chain:A ((12-131)) | ---------------------------------------WWHQSVNVVGSYHTRFGPQIRNDTYLEYEAFAKKDWFDFYGYADAPV-------------PLFMEIEPRFSIDKLTNTDLSFGPFKEWYFANNYIYDMGRNKDGRQSTWYMGLGTDIDTGLPMSLSMNVYAKYQWQNYGAANENEWDGYRFKIKYFVPITDLWGGQLSYIGFTNFDWGSDLGDDSGNAINGIKTRTNNSIASSHILALNYDHWHYSVVARYWHDGGQWNDDAELNFGNGNFNVRSTG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TLY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11467 for 516 contacts (-22.2/contact) +
2D Compatibility (PS) -9826 + (NN) 1418 + (LL) 2152
1D Compatibility (HY) -9200 + (ID) 1500
Total energy: -28423.0 ( -55.08 by residue)
QMean score : 0.158
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