Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLTVPAHDPAARDKPAGRIRQKNEEAILAAAEEEFARHGFKGTSMNTIAQNVGLPKANLHYYFGNKLGLYTAVLSNILELWDSTFNTLGVDDDPAEALARYIRAKMEFSRRYPLASRIFAMEIISGGECLTAHFNQDYRSWFRGRAAVFEAWIAAGRMDPVDPVHLIFLLWGSTQHYADFASQIGLVTGRKRMSRQDFAAAADNLVRIILKGCGLTPPAA
4XK4 Chain:A ((19-209))
-----------------------KKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQVEAVTGATLRDEVFFNQTVENVQRIIIEGIRPR----
General information:
TITO was launched using:
RESULT:
Template:
4XK4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123324 for 1387 contacts (-88.9/contact) +
2D Compatibility (PS) -21380 + (NN) -14181 + (LL) 1224
1D Compatibility (HY) -20800 + (ID) 3950
Total energy: -182411.0 ( -131.51 by residue)
QMean score : 0.488
(partial model without unconserved sides chains):
PDB file :
Tito_4XK4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XK4-query.scw
PDB file :
Tito_Scwrl_4XK4.pdb
: