Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIISDGIYNLIIFVLAVYVGYHVVWNVTPALHTPLMAVTNAISAIVIVGAMLAAALTVTPLGKAMGTLAVALAAVNVFGGFLVTRRMLEMFKKKAPKAGGH
4O9U Chain:A ((9-94))
----------LYIFVLTAFLGYELITRVPVILHTPLMSGSNFIHGVVVVGAMVVLGHAETGLEKLIGFLGVILGAANAAGGYAVTVRMLEMFERKP------
General information:
TITO was launched using:
RESULT:
Template:
4O9U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43630 for 452 contacts (-96.5/contact) +
2D Compatibility (PS) -8802 + (NN) -4069 + (LL) 248
1D Compatibility (HY) -9600 + (ID) 2050
Total energy: -67903.0 ( -150.23 by residue)
QMean score : 0.109
(partial model without unconserved sides chains):
PDB file :
Tito_4O9U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4O9U-query.scw
PDB file :
Tito_Scwrl_4O9U.pdb
: