Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSIPRLPPLNAVRAFEAAARLGSYVAAAKALHVTQPAVGRHVRLLEDWLGARLFERTSRGVLLTPAGRQYYAAVSTALQQIA----EAGGQLSGAR-WLRIMAVPAFSRRWLTSRLETLCAQRPGLKIALEPNPTFDHVEERSADLGIVYGLPGQYANPRALLI-RPKVFPVCSPAYLAAAGPLESAEQLVAHKLIHVDDGEWWNLWFSAIGVDVEVRPAVLYLSNDHALARA-EEGLGIALANEVLVRQELRSGALVRPLA--AEAALECYQVLTPPGTPSADVEWFIGWLGEALREEFPDAVTS |
3T1B Chain:B ((3-285)) | --------LDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEAGERFYKDCSPLLERLASMTEEITDECRGASGRIRISAPSELTKRMMMPMFNAFMEKYPDIHIELMMSNQAD-LDPTEWDVIFRVG-PQRDSSLIARKIGEVKDILVASPQYLSSHPQPTHAEELHQHQLLKGYPLLKWQLTNSQGETVVNSDRGRFQASALNVVRSACSEGLGITLMPDVMLREFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHQPEKVRLFIDFVIGYHL--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T1B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160181 for 1943 contacts (-82.4/contact) +
2D Compatibility (PS) -29465 + (NN) -6749 + (LL) 1012
1D Compatibility (HY) -15200 + (ID) 3650
Total energy: -214233.0 ( -110.26 by residue)
QMean score : 0.395
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