Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVLFAYPGQGAQRPGMLAALPD-EPPVRACLEQAADCLGQAPAELESA---EALRGTRAVQLCLLIAGVAASRLLE-TRGHRPGLVAGLSIGAYPAAVVAGALDFDDALRLVALRGELMQAAWPEGYG-MSAILGLEQAQLEALILAVRRE---HPPLYLANVNAERQLVVAGSEAA----LAALAERARAAGASAAKRLAVSVPSHCALLDEPAARLAEAFAGIRLHRPRVPYLSSSRARLVAEPAALADDLAGNMARRVEWLATLRSAYERGARLHLELPPGRVLSGL---------ARPLFGCATPAFEGSRADTLDALLREEEKRTR |
| 3K89 Chain:A ((5-311)) | -TLAFVFPGQGSQSLGMLAELSELHPQIRETFAEASEGAGVDLWALSQGGPEEMLNRTEYTQPALLAAGVAVWRLWTAQRGQRPALLAGHSLGEYTALVAAGVLSLHDGAHLVRLRGQFMQAAAPAGVGAMAAVLGAE----DAVVLEVCAEAAGSQVVVPANFNSPGQIVIGGDAAAVDRALALLAER----GVRKAVKLAVSVPSHTPLMRDAANQLGEAMAGLSWHAPQIPVVQNVDARVHDGSAAIRQALVEQLYLPVQWTGCVQALASQGITRIAECGPGKVLSGLIKRIDKSLDARPL---ATPA---DYAGALDAWAH------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K89.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -198211 for 2577 contacts (-76.9/contact) +
2D Compatibility (PS) -31260 + (NN) -18376 + (LL) 2208
1D Compatibility (HY) -19200 + (ID) 6350
Total energy: -271189.0 ( -105.23 by residue)
QMean score : 0.592
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