Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMGVNANISESLTGTIEAPFPEFEAPPANPMEVLRNWLERARRYGVREPRALALATVDGQGRPSTRIVVIAELGERGVVFATHADSQKGRELAQNPWASGVLYWRESSQQIILNGRAERLPDERADAQWLSRPYQTHPMSIASRQSETLADIHALRAEARRLAETDGPLPRPPGYCLFELCLESVEFWGNGTERLHERLRYDRDEGGWKHRYLQP
1TY9 Chain:A ((21-222))
-------------GTLDAPFPEYQTLPADPMSVLHNWLERARRVGIREPRALALATADSQGRPSTRIVVISEISDAGVVFSTHAGSQKGRELLHNPWASGVLYWRETSQQIILNGQAVRLPNAKADDAWLKRPYATHPMSSVSRQSEELQDVQAMRNAARQLAELQGPLPRPEGYCVFELRLESLEFWGNGQERLHERLRYDRSDTGWNVRRLQP
General information:
TITO was launched using:
RESULT:
Template:
1TY9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58573 for 1440 contacts (-40.7/contact) +
2D Compatibility (PS) -22214 + (NN) -16138 + (LL) 900
1D Compatibility (HY) -19600 + (ID) 7350
Total energy: -122975.0 ( -85.40 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_1TY9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TY9-query.scw
PDB file :
Tito_Scwrl_1TY9.pdb
: