Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMPNLTLADLQGEIQANVRTALAEDVGG-----GDLTAQLIDPQREAEARVITREHATIAGRAWVDEVFRQVDPRVLVTWQVEDGQRVEPNQMLFQLKGPARALLTGERSALNFLQLLSGTATRSQHYADLVAGTAVKLLDTRKTLPGLRLAQKYAVTCGGCHNHRIGLYDAFLIKENHIAACGGIDRAIAEARRIAPGKPVEVEVENLDELRQALEAGADIVMLDELSLDDMRTAVALTAGRAKLEASGGINEGTLRNIAETGVDYISIGTLTKDVRAVDLSMRLTL
3PAJ Chain:A ((18-294))--------LPADITRSVIDTLKEDLGGTLDPAADITASLIPADRISTATIITREAGVFCGQLWADEVFKQLGGQVSIEWHVQDGDTLTPNQTLCTLTGPARILLTGERNAMNFIQTLSGCATATARYVQELKGTQCRLLDTRKTIPGLRSALKYAVACGGGYNHRIGVFDAYLIKENHIIACGGIRQAISTAKQLNPGKPVEVETETLAELEEAISAGADIIMLDNFSLEMMREAVKINAGRAALENSGNITLDNLKECAETGVDYISVGALTKHLKALDLSMRF--


General information:
TITO was launched using:
RESULT:

Template: 3PAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -163771 for 2236 contacts (-73.2/contact) +
2D Compatibility (PS) -30293 + (NN) -9442 + (LL) 688
1D Compatibility (HY) -28000 + (ID) 7750
Total energy: -238568.0 ( -106.69 by residue)
QMean score : 0.563

(partial model without unconserved sides chains):
PDB file : Tito_3PAJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PAJ-query.scw
PDB file : Tito_Scwrl_3PAJ.pdb: