Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNEADYLRLLTRQAEQANDFLSNARKWDRERWVCQRFLEALNVPYRQEDFAAPGEQPPDVLFKGAGFEVFFVLDEGRRLNEEWREELTRRRQAVSLRQLIRREERPQRIAAAELQARLAPTLRKKAHNYSERGIDHGELDLLAFV----NLKRAVPDFNTPFPPPTEY---------LRQGWRSLSMVGPTFARVLFAHSGAPEFLRANLGRSILFDAGVGL |
1Q77 Chain:A ((24-82)) | -----------------------------------------------------------------------------------------------------------------------------AVNFSEK--LGAELDILAVLEDVYNLERANVTFGLPFPPEIKEESKKRIERRLREVWEKLT------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q77.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 662 for 188 contacts (3.5/contact) +
2D Compatibility (PS) -4946 + (NN) -1450 + (LL) 12964
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: 2130.0 ( 11.33 by residue)
QMean score : 0.135
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