Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIEVRNLLKVFDTRGQVVRAVDDVSTRVARGEVLVVIGPSGSGKSTFLRCLNGLEEFDEGSVSIDGVDLADPRTDINAYRREVGMVFQHFNLFPHMTVLENLCLAQRVVRKRGKAEREAKARALLAKVGIGQKADEYPSRLSGGQQQRVAIARALCMDPKVMLFDEPTSALDPEMVGEVLDVMKTLAVEGMTMVCVTHEMGFAREVADRVLFFDHGKLLEDAPPAQFFDNPQDPRAQAFLRQVL
2OLJ Chain:A ((24-263))
MIDVHQLKKSFGS----LEVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDGINLKAKDTNLNKVREEVGMVFQRFNLFPHMTVLNNITLAPMKVRKWPREKAEAKAMELLDKVGLKDKAHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLANEGMTMVVVTHEMGFAREVGDRVLFMDGGYIIEEGKPEDLFDRPQHERTKAFLSKVF
General information:
TITO was launched using:
RESULT:
Template:
2OLJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -168335 for 1994 contacts (-84.4/contact) +
2D Compatibility (PS) -26658 + (NN) -15540 + (LL) 240
1D Compatibility (HY) -30000 + (ID) 7600
Total energy: -247893.0 ( -124.32 by residue)
QMean score : 0.611
(partial model without unconserved sides chains):
PDB file :
Tito_2OLJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OLJ-query.scw
PDB file :
Tito_Scwrl_2OLJ.pdb
: