Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRPSGRAADQLRPIRITRHYTKHAEGSVLVEFGDTKVICTVSAESGVPRFLKGQGQGWLTAEYGMLPRSTGERNQREASRGKQGGRTLEIQRLIGRSLRAALDLSKLGENTLYIDCDVIQADGGTRTASITGATVALIDALAVLKKRGALKGNPLKQMVAAVSVGIYQGVPVLDLDYLEDSAAETDLNVVMTDAGGFIEVQGTAEGAPFRPAELNAMLELAQQGMQELFELQRAALAE
1R6L Chain:A ((2-239))
-NRPSGRAADQLRPIRITRHYTKHAEGSVLVEFGDTKVICTVSAESGVPRFLK---QGWLTAEYGMLPRSTGERNQREASRGKQGGRTLEIQRLIGRSLRAALDLSKLGENTLYIDCDVIQADGGTRTASITGATVALIDALAVLKKRGALKGNPLKQMVAAVSVGIYQGVPVLDLDYLEDSAAETDLNVVMTDAGGFIEVQGTAEGAPFRPAELNAMLELAQQGMQELFELQRAALAE
General information:
TITO was launched using:
RESULT:
Template:
1R6L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107338 for 1981 contacts (-54.2/contact) +
2D Compatibility (PS) -26194 + (NN) -17251 + (LL) -16
1D Compatibility (HY) -28800 + (ID) 11750
Total energy: -191349.0 ( -96.59 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_1R6L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R6L-query.scw
PDB file :
Tito_Scwrl_1R6L.pdb
: