Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNLIISVEGDLVVIRSESTFKNTEISFKLGVEFDEITPDDRKVKSIITLDGGVLVHVQKWDGKSTTIKKRRDGDKLVVECVMKGVTSTRVYERA
2Q9S Chain:A ((25-155))
-CDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDLVTIRSESTFKNTEISFKLGVEFDEITADDRKVKSIITLDGGALVQVQKWDGKSTTIKRKRDGDKLVVECVMKGVTSTRVYERA
General information:
TITO was launched using:
RESULT:
Template:
2Q9S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39308 for 937 contacts (-42.0/contact) +
2D Compatibility (PS) -14813 + (NN) -4206 + (LL) 208
1D Compatibility (HY) -17600 + (ID) 6100
Total energy: -81819.0 ( -87.32 by residue)
QMean score : 0.593
(partial model without unconserved sides chains):
PDB file :
Tito_2Q9S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q9S-query.scw
PDB file :
Tito_Scwrl_2Q9S.pdb
: