Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTLKTTQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVECVMNNVTCTRIYEKVE
4AZR Chain:A ((4-137))
MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTVKTTQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVECVMNNVTCTRIYEKV-
General information:
TITO was launched using:
RESULT:
Template:
4AZR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16852 for 738 contacts (-22.8/contact) +
2D Compatibility (PS) -14879 + (NN) -3078 + (LL) 104
1D Compatibility (HY) -18000 + (ID) 6650
Total energy: -59355.0 ( -80.43 by residue)
QMean score : 0.393
(partial model without unconserved sides chains):
PDB file :
Tito_4AZR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AZR-query.scw
PDB file :
Tito_Scwrl_4AZR.pdb
: