Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLLLAALLTAGVTAHSISTRAVWQFRNMIKCTIPGSDPLREYNNYGCYCGLGGSGTPVDDLDRCCQTHDHCYNQAKKLESCKFLIDNPYTNTYSYKCSGNVITCSDKNNDCESFICNCDRQAAICFSKVPYNKEYKDLDTKKHC
1HN4 Chain:A ((3-131))
-----------------GISSRALWQFRSMIKCAIPGSHPLMDFNNYGCYCGLGGSGTPVDELDRCCETHDNCYRDAKNLDSCKFLVDNPYTESYSYSCSNTEITCNSKNNACEAFICNCDRNAAICFSKAPYNKEHKNLDTKKYC
General information:
TITO was launched using:
RESULT:
Template:
1HN4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64520 for 948 contacts (-68.1/contact) +
2D Compatibility (PS) -13791 + (NN) -7263 + (LL) 2072
1D Compatibility (HY) -16000 + (ID) 4850
Total energy: -104352.0 ( -110.08 by residue)
QMean score : 0.380
(partial model without unconserved sides chains):
PDB file :
Tito_1HN4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HN4-query.scw
PDB file :
Tito_Scwrl_1HN4.pdb
: