Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLRKLNPPDESGPGCMSCKCVLS
1IOZ Chain:A ((1-169))
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAG-------RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLR--------------------
General information:
TITO was launched using:
RESULT:
Template:
1IOZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102882 for 1315 contacts (-78.2/contact) +
2D Compatibility (PS) -18108 + (NN) -7889 + (LL) 892
1D Compatibility (HY) -22800 + (ID) 8100
Total energy: -158887.0 ( -120.83 by residue)
QMean score : 0.690
(partial model without unconserved sides chains):
PDB file :
Tito_1IOZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IOZ-query.scw
PDB file :
Tito_Scwrl_1IOZ.pdb
: