Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRSRRVDVMDVMNRLILAMDLMNRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAEFRKRFGCRIIADFKVADIPETNEKICRATFKAGADAIIVHGFRGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFLISPGVGAQGGDPGETLRFADAIIVGRSIYLADNPAAAAAGIIESIKDLLNP
3G1A Chain:A ((8-225))
-------VMDVMNRLILAMDLMNRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAEFRKRFGCRIIADFKVADIPETNEKICRATFKAGADAIIVHGFPGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFLISPGVGAQGGDPGETLRFADAIIVGRSIYLADNPAAAAAGIIESIKDL---
General information:
TITO was launched using:
RESULT:
Template:
3G1A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -177451 for 1914 contacts (-92.7/contact) +
2D Compatibility (PS) -23446 + (NN) -6030 + (LL) 552
1D Compatibility (HY) -31600 + (ID) 10850
Total energy: -248825.0 ( -130.00 by residue)
QMean score : 0.830
(partial model without unconserved sides chains):
PDB file :
Tito_3G1A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G1A-query.scw
PDB file :
Tito_Scwrl_3G1A.pdb
: