Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDVRASGLLPRWEQTQRFIGEMRGT
2IXC Chain:A ((1-198))
MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDVRASGLLPRWEQTQRFIGE----
General information:
TITO was launched using:
RESULT:
Template:
2IXC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107707 for 1616 contacts (-66.7/contact) +
2D Compatibility (PS) -21360 + (NN) -11234 + (LL) 188
1D Compatibility (HY) -26800 + (ID) 9900
Total energy: -176813.0 ( -109.41 by residue)
QMean score : 0.880
(partial model without unconserved sides chains):
PDB file :
Tito_2IXC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IXC-query.scw
PDB file :
Tito_Scwrl_2IXC.pdb
: