Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQGRDITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLYES
2QTN Chain:A ((1-189))
MRKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQGRDITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLYES
General information:
TITO was launched using:
RESULT:
Template:
2QTN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -145149 for 1445 contacts (-100.4/contact) +
2D Compatibility (PS) -20716 + (NN) -12942 + (LL) 0
1D Compatibility (HY) -30000 + (ID) 9450
Total energy: -218257.0 ( -151.04 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_2QTN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QTN-query.scw
PDB file :
Tito_Scwrl_2QTN.pdb
: