Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNYKLTYFNMRGRAEIIRYIFAYLDIQYEDHRIEQADWPEIKSTLPFGKIPILEVDGLTLHQSLAIARYLTKNTDLAGNTEMEQCHVDAIVDTLDDFMSCFPWAEKKQDVKEQMFNELLTYNAPHLMQDLDTYLGGREWLIGNSVTWADFYWEICSTTLLVFKPDLLDNHPRLVTLRKKVQAIPAVANWIKRRPQTKL
4EC0 Chain:A ((2-200))
MPNYKLTYFNMRGRAEIIRYIFAYLDIQYEDHRIEQADWPEIKSTLPFGKIPILEVDGLTLHQSLAIARYLTKNTDLAGNTEMEQCHVDAIVDTLDDFMSCFPWAEKKQDVKEQMFNELLTYNAPHLMQDLDTYLGGREWLIGNSVTWADFYWEICSTTLLVFKPDLLDNHPRLVTLRKKVQAIPAVANWIKRRPQTKL
General information:
TITO was launched using:
RESULT:
Template:
4EC0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -137644 for 1443 contacts (-95.4/contact) +
2D Compatibility (PS) -21212 + (NN) -10299 + (LL) 0
1D Compatibility (HY) -31200 + (ID) 9950
Total energy: -210305.0 ( -145.74 by residue)
QMean score : 0.713
(partial model without unconserved sides chains):
PDB file :
Tito_4EC0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EC0-query.scw
PDB file :
Tito_Scwrl_4EC0.pdb
: