Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSSSFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKTRGLPKAKSHAPEVITSSPLK
1F0R Chain:A ((1-234))
IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSSSFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKT--------------------
General information:
TITO was launched using:
RESULT:
Template:
1F0R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140183 for 2020 contacts (-69.4/contact) +
2D Compatibility (PS) -25697 + (NN) -11105 + (LL) 852
1D Compatibility (HY) -32000 + (ID) 11700
Total energy: -219833.0 ( -108.83 by residue)
QMean score : 0.720
(partial model without unconserved sides chains):
PDB file :
Tito_1F0R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F0R-query.scw
PDB file :
Tito_Scwrl_1F0R.pdb
: