Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLGMNMLLITLFLLLPLSMLKGEPWEGCLHCTHTTWSGNIMTKTLLYHTYYECAGTCLGTCTHNQTTYSVCDPGRGQPYVCYDPKSSPGTWFEIHVGSKEGDLLNQTKVFPSGKDVVSLYFDVCQIVSMGSLFPVIFSSMEYYSSCHKNRYAHPACSTDSPVTTCWDCTTWSTNQQSLGPIMLTKIPLEPDCKTSTCNSVNLTILEPDQPIWTTGLKAPLGARVSGEEIGPGAYVYLYIIKKTRTRSTQQFRVFESFYEHVNQKLPEPPPLASNLFAQLAE--
1JDI Chain:A ((1-223))----MLEDLKRQVLEANLALPKHNL-------VTLTWGNVSAVD------------------RERGVFVIKPSGVDYSIM----TADDMVVVSIETGEVVEGAKKPSSDTPTHRLLYQAFPSIGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEK----QGIDAAQMPGVLVH-----------------------SHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLNKHYLRKH


General information:
TITO was launched using:
RESULT:

Template: 1JDI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68128 for 1885 contacts (-36.1/contact) +
2D Compatibility (PS) -23020 + (NN) -10208 + (LL) 2692
1D Compatibility (HY) 4000 + (ID) 1050
Total energy: -95714.0 ( -50.78 by residue)
QMean score : 0.213

(partial model without unconserved sides chains):
PDB file : Tito_1JDI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JDI-query.scw
PDB file : Tito_Scwrl_1JDI.pdb: