Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHPTLSWRHLPTRGGEPKRLRIPLSFASIAWFLTLTITPQASSKRLIDSSNPHRPLSLTWLIIDPDTGVTVNSTRGVAPRGTWWPELHFCLRLI-----NPAVKSTPPNL----------VRSYGFYCCPGTEKEKYCGGSGESFCRRWSCVTSNDGDWKWPISLQD--RVKFSFVNS----------GPGKYKVMKLYKDKSCSPSDLDYLKISFTEKGKQENIQKWINGMSWGIVFYKYGGGAGSTLTIRLRIETGTEPPVAVG
1LCS Chain:A ((4-208))---------------------------------------------------PHQVYNVTWTITNLVTGTKANATSMLGTLTDAFPTMYFDLCDIIGNTWNPSDQEPFPGYGCDQPMRRWQQRNTPFYVCPGHANRKQCGGPQDGFCAVWGCETTGETYWR-PTSSWDYITVKKGVTQGIYQCSGGGWCGPCYDKAVHSSTTGASEGGRCNPLILQFTQKGRQTS---WDGPKSWGLRLYRSGYDPIALFSVSRQVMTITP------


General information:
TITO was launched using:
RESULT:

Template: 1LCS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67136 for 1263 contacts (-53.2/contact) +
2D Compatibility (PS) -19380 + (NN) -15708 + (LL) 3688
1D Compatibility (HY) -3600 + (ID) 2700
Total energy: -104836.0 ( -83.01 by residue)
QMean score : 0.312

(partial model without unconserved sides chains):
PDB file : Tito_1LCS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1LCS-query.scw
PDB file : Tito_Scwrl_1LCS.pdb: