Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSLQPDAGNASWNGTEAPGGGARATPYSLQVTLTLVCLAGLLMLLTVFGNVLVIIAVFTSRALKAPQNLFLVSLASADILVATLVIPFSLANEVMG-YWYFGKAWCEIYLALDVLFCTSSIVHLCAISLDRYWSITQAIEYNL---KRTPRRIKAIIITVWVISAVISFPPLISIEKKGGGGGPQPAEPR-CEINDQKWYVISSCIGSFFAPCLIMILVYVRIYQIAKRRTRVPPSRRGPDAVAAPPGGTERRPNGLGPERSAGPGGAEAEPLPTQLNGAPGEPAPAGPRDTDALDLEESSSSDHAERPPGPRRPERGPRGKGKARASQVKP-GDSLP--RRGP--------GATGIGTPAAGP--------GEERVGAAKASRWRGRQ----------------------NREKRFTFVLAVVIGVFVVCWFPFFFTYTLTA--VGCSVPRTLFKFFFWFGYCNSSLNPVIYTIFNHDFRRAFKKILCRGDRKRIV |
| 3PBL Chain:A ((41-472)) | ------------------------------YALSYCA-----LILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTTG--------DPTVCSISNPD-FVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRR----KNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKS-PS-LNAAKSELDKAIGRNTNGV-----ITKDEAEKLFN---QDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAK-SRWYNQTPNRAKRVITTFRTGTWDAYGVPLREKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQTCHVSPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILSC------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PBL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177991 for 2733 contacts (-65.1/contact) +
2D Compatibility (PS) -38441 + (NN) 513 + (LL) 1092
1D Compatibility (HY) -37200 + (ID) 7500
Total energy: -259527.0 ( -94.96 by residue)
QMean score : 0.252
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