Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MERKFMSLQPSISVSEMEPNGTFSNNNSRNCTIENFKREFFPIVYLIIFFWGVLGNGLSIYVFLQPYKKSTSVNVFMLNLAISDLLFISTLPFRADYYLRGSNWIFGDLACRIMSYSLYVNMYSSIYFLTVLSVVRFLAMVHPFRLLHVTSIRSAWILCGIIW-ILIMASSIMLLDSGS--EQNGSVTSCLELNLYKIAKLQTMNYIALVVGCL-LPFFTLSICYLLIIRVLL-----------------KVEVPESGLRVS-----------------------------HRKALTTIIITLIIFFLCFLPYHTLRTVHLTT----WKVGLC--KDRLHKALVITLALAAANACFNPLLYYFAGENFKDRLKSALRKGHPQKAKTKCVFPVSVWLRKETRV |
| 4XNW Chain:A ((44-382)) | -------------------------------TKTGFQFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYPLKSLGRLKKKNAICISVLVWLIVVVAISPILFYSGTGVRKNKTIT-CYDTTSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XNW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -280284 for 2133 contacts (-131.4/contact) +
2D Compatibility (PS) -28841 + (NN) -5849 + (LL) 3692
1D Compatibility (HY) -33600 + (ID) 4550
Total energy: -349432.0 ( -163.82 by residue)
QMean score : 0.288
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