Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSILDGLADTTFRTITTDLLYVGSNDIQYEDIKGDMASKLGYFPQKFPLTSFRGSPFQEKMTAGDNPQLVPADQVNITEFYNKSLSSFKENEENIQCGENFMDIECFMVLNPSQQLAIAVLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVFHRKDSRNVFLFKLGGVTASFTASVGSLFLTAIDRYISIHRPLAYKRIVTRPKAVVAFCLMWTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFW--IGVTSVLLLFIVYAYMYIL-------WKAHSHAVRMIQRGTQKSII-----------------------------------IHTSEDGKV----------QVTRPDQARMDIRLAKTLVLILVVLII-------CWGPLLAIMVYDVFGKMNKLIKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSCEGTAQPLDNSMGDSDCLHKHANNAASVHRAAESCIKSTVKIAKVTMSVSTDTSAEAL |
| 4Z35 Chain:A ((41-434)) | --------------------------------------------------------------------QC----------FYNESIAFFYNRSGKHLATE----------WNTVSKLVMG-LGITVCIFIMLANLLVMVAIYVNRRFHF-PIYYLMANLAAADFFAGLAYFYLMFNTGPNTRRLTVSTWLLRQGLIDTSLTASVANLLAIAIERHITVFRMQLHTRMSNR-RVVVVIVVIWTMAIVMGAIPSVGWNCICDIENCSNMAPLYSDSYLVFWAIFNLVTFVVMVVLYAHIFGYVADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKAMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLRNRDTMMSLLKTVVIVLGAFIICWTPGLVLLLLDVCCPQCDVLAYE-KFFLLLAEFNSAMNPIIYSYRDKEMSATFRQILG----------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Z35.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -226129 for 2262 contacts (-100.0/contact) +
2D Compatibility (PS) -32765 + (NN) -12791 + (LL) 8316
1D Compatibility (HY) -35200 + (ID) 4650
Total energy: -303219.0 ( -134.05 by residue)
QMean score : 0.238
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