Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEDFNMESDSFEDFWKGEDLSNYSYSSTLPPFLLDAAPCE-PESLEINKYFVVIIYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRYL-VKFICL-SI--WGLSLLLALPVLLFRRTVYSSNVSPACYEDMGNNTANWRMLLRILPQSFGFIVPLLIMLFCYGFTLRTLFKAHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCERRNHIDRALDATEILGILHSCLNPLIYAFIGQKFRHGLLKILAI--HGLISKDSLPKDSRPSFVGSSSGHTSTTL |
4XT1 Chain:A ((27-318)) | ----------------------------------DATPCVFTDVLNQSKPVTLFLYGVVFLFGSIGNFLVIFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLD-----SVPCTLLTACFYVAMFASLCFITEIALDRYYAIVYM-------RYRPVKQACLFSIFWWIFAVIIAIPHFMV-----VTKKDNQCMTDYDYLEVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAVSQSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAEFR----------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4XT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -248363 for 2036 contacts (-122.0/contact) +
2D Compatibility (PS) -29514 + (NN) -17011 + (LL) 2864
1D Compatibility (HY) -36000 + (ID) 5100
Total energy: -333124.0 ( -163.62 by residue)
QMean score : 0.301
|
|
|