Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMDTGPDQSYFSGNHWFVFSVYLLTFLVGLPLNLLALVVFVGKLQRRPVAVDVLLLNLTASDLLLLLFLPFRMVEAANGMHWPLPFILCPLSGFIFFTTIYLTALFLAAVSIERFLSVAHP---LWYKTRPRLGQAGLVSVACWLLASAHCSVVYVIEFSGDISHSQGTNGTCYLEFRKDQLAILLPVRLEMAVVLFVVPLIITSYCYSRLVWIL-------GRGGSHRRQRRVAGLLAATLLNFLVCFGPYNVSHVVGYICG------ESPAWRIYVTLLSTLNSCVDPFVYYFSSSGFQADFHELLRRLCGLWGQWQQESSMELKEQKGGEEQRADRPAERKTSEHSQGCGTGGQVACAES
5C1M Chain:A ((20-296))----------------IMALYSIVCVVGLFGNFLVMYVIV-RYTKMKTATNIYIFNLALADALATSTLPFQSVNYLMGT-WPFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRT-PR--NAKIVNVCNWILSSA---IGLPVMFMATTKYRQGSID-CTLTFSHPTWYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRMLSGSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALITIPETTFQTVSWHFCIALGYT-NSCLNPVLYAFLDENFKRCF-----------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5C1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -244566 for 1959 contacts (-124.8/contact) +
2D Compatibility (PS) -27176 + (NN) -13883 + (LL) 3704
1D Compatibility (HY) -30400 + (ID) 3600
Total energy: -315921.0 ( -161.27 by residue)
QMean score : 0.325

(partial model without unconserved sides chains):
PDB file : Tito_5C1M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5C1M-query.scw
PDB file : Tito_Scwrl_5C1M.pdb: