Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METNSSLPTNISGGTP-AVSAGYLFLDIITYLVFAVTFVLGVLGNGLVIW-VAGFRMTHTVTTISYLNLAVADFCFTSTLPFFMVRKAMGGHWPFGWFLCKFVFTIVDINLFGSVFLIALIALDRCVCVLHPVWTQNHRTVSLAKKVIIGPWVMALLLTLPVIIRVTTVPGKTGTVACTFNF-SP-WTNDPKERINVAVAMLTVRGIIRFIIGFSAPMSIVAVSYG----LIATKIHKQGLIKSSRPLRVLSFV----AAAFFLCWSPYQVVALIAT---VRIRELLQGMYKEIGIAVDVTSALAFFNSCLNPMLYVFMGQDFRERLIHALPASLERALTEDSTQTSDTATNSTLPSAEVELQAK |
| 4N6H Chain:A ((112-403)) | -------------GSPGARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLME-TWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRP-RDGAVVCMLQFPSPSWYWD------------TVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRDPL------VVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG----------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4N6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -240925 for 2053 contacts (-117.4/contact) +
2D Compatibility (PS) -28111 + (NN) -5687 + (LL) 3504
1D Compatibility (HY) -24400 + (ID) 5050
Total energy: -300669.0 ( -146.45 by residue)
QMean score : 0.238
|
|
|