Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MELAVGNLSEGNASWPEPPAPEPGPLFGIGVENFVTLVVFGLIFALGVLGNSLVITVLARSKPGKPRSTTNLFILNLSIADLAYLLFCIPFQATVYALPTWVLGAFICKFIHYFFTVSMLVSIFTLAAMSVDRYVAIVHSRRSSSLRVSRNALLGVGCIWALSIAMASPVAYHQGLFHPRASNQTFCWEQWPDPR--HKKAYVVCTFVFGYLLPLLLICFCYAKVLNHLHKKLKNM-SKKSEASKKKTAQTVLVVVVVFGISWLPHHI-IHLWAEFGV---FPLTPASFLFRITAHCLAYSNSSVNPIIYAFLSENFRKAYKQVFKCHIRKDSHLSDTKESKSRIDTPPSTNCTHV |
| 4N6H Chain:A ((131-410)) | --------------------------------------LYSAVCAVGLLGNVLVMFGIVRYT--KMKTATNIYIFNLALAD-ALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMV-MAVTRPR-DGAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRDPLVVAALHLCIA---LGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG-------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4N6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -227766 for 2102 contacts (-108.4/contact) +
2D Compatibility (PS) -27789 + (NN) -7885 + (LL) 2260
1D Compatibility (HY) -30400 + (ID) 4850
Total energy: -296430.0 ( -141.02 by residue)
QMean score : 0.236
|
|
|