Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDVTSQARGVGLEMYPGTAQPAAPNTTSPELNLSHPLLGTALANGTGELSEHQQYVIGLFLSCLYTIFLFPIGFVGNILILVVNISFREKMTIP-DLYFINLAVADLILVADSLIEVFNLHERYYDIAVLCTFMSLFLQVNMYSSVFFLTWMSFDRYIALARAMRCSLFRTKHHARLSCGLIWMASVSATLVPFTAVHLQHTDEACFCFADVREVQW-----LEVTLG-FIVPFAIIGLCYSLIVRVL-VRAHRHRGLRPRRQKALRMILAVVLVFFVCWLPENVFISVHLLQRTQPGAAPC--KQSFRHAHPLTGHIVNLAAFSNSCLNPLIYSFLGETFRDKLRLYIEQKTNLPALNRFCHAALKAVIPDSTEQSDVRFSSAV |
| 4XT1 Chain:A ((51-310)) | ------------------------------------------------------------------VFLF--GSIGNFLV-IFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLD-----SVPCTLLTACFYVAMFASLCFITEIALDRYYAIVY-MR---YRPVKQACLFSIFWWIFAVIIAIPHFMVV--TKKDNQCMTDYDYLEVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAVSQSRHKG------RIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESL----AFCHCCLNPLLYVFVGTKFRQELHCLLAEFR-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208523 for 1744 contacts (-119.6/contact) +
2D Compatibility (PS) -24655 + (NN) -5843 + (LL) 7992
1D Compatibility (HY) -37200 + (ID) 4550
Total energy: -272779.0 ( -156.41 by residue)
QMean score : 0.283
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