Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDTGPDQSYFSGNHWFVFSVYLLTFLVGLPLNLLALVVFVGKLRCRPVAVDVLLLNLTASDLLLLLFLPFRMVEAANGMHWPLPFILCPLSGFIFFTTIYLTALFLAAVSIERFLSVAHPLWYKTRPRLGQAGLVSVACWLLASAHCSVVYVIEFSGDISHSQGTNGTCYLE------FWKDQLAILLPVRLEMAVVLFVVPLIITSYCYSRLVWIL-------GRGGSHRRQRRVAGLVAATLLNFLVCFGPYNVSHVVGYICGESPVWRIYV------TLLSTLNSCVDPFVYYFSSSGFQADFHELLRRLCGLWGQWQQESSMELKEQKGGEEQRADRPAERKTSEHSQGCGTGGQVACAEN |
| 4EA3 Chain:A ((128-405)) | ----------------IVGLYLAVCVGGLLGNCLVMYVILRHTKMK-TATNIYIFNLALADTLVLLTLPFQGTDILLGF-WPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHP-------TSSKAQAVNVAIWALASV-VGVPVAIMGSAQVEDEE---IECLVEIPTPQDYWGPVFAICI------FLFSFIVPVLVISVCYSLMIRRLRGVRLLSGSREKDRNLRRITRLVLVVVAVFVGCWTPVQV-FVLAQGLGVQPSSETAVAILRFCTALGYVNSCLNPILYAFLDENFKACF----R------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -252546 for 1909 contacts (-132.3/contact) +
2D Compatibility (PS) -25942 + (NN) -8937 + (LL) 4136
1D Compatibility (HY) -25600 + (ID) 3950
Total energy: -312839.0 ( -163.88 by residue)
QMean score : 0.273
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