Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQAAGHPEPLDSRGSFSLPTMGANVSQDNGTGHNATFSEPLPFLYVLLPAVYSGICAVGLTGNTAVILVILRAPKMKTVTNVFILNLAVADGLFTLVLPVNIAEHLLQYWPFGELLCKLVLAVDHYNIFSSIYFLAVMSVDRYLVVLATVRSRHMPWRTYRGAKVASLCVWLGVTVLVLPFFSFAGVYSNELQVPSCGLSFPWPEQVWFKASRVYTLVLGFVLPVCTICVLYTDLLRRLRAVRLRSGAKALGKARRKVTVLVLVVLAVCLLCWTPFHLASVVALTTDLP-QTPLVISMSYVITSLSYANSCLNPFLYAFLDDNFRKNFRSILRC
4N6H Chain:A ((124-410))-------------------------------------------LAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKA--LDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAV-VCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRK


General information:
TITO was launched using:
RESULT:

Template: 4N6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -257637 for 2222 contacts (-115.9/contact) +
2D Compatibility (PS) -28729 + (NN) -8761 + (LL) 812
1D Compatibility (HY) -36400 + (ID) 6150
Total energy: -336865.0 ( -151.60 by residue)
QMean score : 0.320

(partial model without unconserved sides chains):
PDB file : Tito_4N6H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4N6H-query.scw
PDB file : Tito_Scwrl_4N6H.pdb: