Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSTLFSQVENHSVHSNFSEKNAQLLA-FENDDCHLPLAMIFTLALAYG-AVIILGVSGNLALIIIILKQKEMRNVTNILIVNLSFSDLLVAIMCLPFTFVYTLMDHWVFGEAMCKLNPFVQCVSITVSIFSLVLIAVERHQLIINP-RGWRPNNRHAYVGIAVIWVLAVASSLPFLI-YQVMTDEPFQ-NVTLDAYKDKYVCFDQFPSDSHRLSYTTLLLVLQYFGPLCFIFICYFKIYIRLKRRNNMMDKMRDNKYRSSETKRINIMLLSIVVAFAVCWLPLTIFNTVFDWNHQIIATCNHNLLFLLCHLTAMISTCVNPIFYGFLNKNFQRDLQFFFNFCDFRSRDDDYETIAMSTMHTDVSKTSLKQASPVAFKKINNNDDNEKI |
| 3C9M Chain:A ((5-327)) | ---------EGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPH--------EETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTR---MVIIMVIAFLICWLPYAGV-AFYIFTHQ--GSCFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQF-RNCMVTTLCCGKNP------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C9M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192853 for 2873 contacts (-67.1/contact) +
2D Compatibility (PS) -31815 + (NN) 1687 + (LL) 4244
1D Compatibility (HY) -36800 + (ID) 4150
Total energy: -259687.0 ( -90.39 by residue)
QMean score : 0.229
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