Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEVSLNHPASNTTSTKNNNSAFFYFESCQPPSPALLLLCIAYTVVLIVGLFGNLSLIIIIFKKQRKAQNFTSILIANLSLSDTLVCVMCIHFTIIYTLMDHWIFGDTMCRLTSYVQSVSISVSIFSLVFTAVERYQLIVNP-RGWKPSVTHAYWGITLIWLFSLLLSIPFFLSYHLTDEPFRNLSLPTDLYTHQVACVENWPSKKDRLLFTTSLFLLQYFVPLGFILICYLKIVICLRRRNAKVDKKKENEGRLNENKRINTMLISIVVTFGACWLPRISSMSSLTGIMRC
3C9M Chain:A ((42-267))----------------------------------------AYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPH--------EETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAA---QQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGS


General information:
TITO was launched using:
RESULT:

Template: 3C9M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -174171 for 1654 contacts (-105.3/contact) +
2D Compatibility (PS) -22349 + (NN) 298 + (LL) 2784
1D Compatibility (HY) -26400 + (ID) 2700
Total energy: -222538.0 ( -134.55 by residue)
QMean score : 0.238

(partial model without unconserved sides chains):
PDB file : Tito_3C9M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3C9M-query.scw
PDB file : Tito_Scwrl_3C9M.pdb: