Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MENRNNMTEFVLLGLTENPKMQKIIFVVFFVIYIITVVGYVLIVVTITASPSLGSPMYLSLAYLSFIDACYSSVNTPNLITHSLYGKKAIL-FNGCMTQVFGEHFFGGAEGIL----LTVMAYDHYVAICKPLHYMTIMNQCVCALLMGVVWMGGFLHATIQILFIFQLPFCGPNVIDHFMCD--LNPLLNLACTDTHMLELFIAANSG-----FICLLNFALLLVSYVVILCSL--RTHSLEARH-KALSTCVSHITVVILFFVPCIFVYMRPAATL-------------PIDKAVAIFYTMITPMLNPLIYTLKNAQMKNAIRKLCSRKDISGDK |
2Z73 Chain:A ((60-328)) | -----------------------------------------------TKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAAC--KVYG--FIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIF------GWGAYTLEGVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z73.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183622 for 1688 contacts (-108.8/contact) +
2D Compatibility (PS) -24251 + (NN) -7453 + (LL) 6292
1D Compatibility (HY) -19200 + (ID) 2900
Total energy: -231134.0 ( -136.93 by residue)
QMean score : 0.263
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