Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQVTNTTQEGIYFILTDIPGFEASHIWISIPVCCLYTISIMGNTTILTVIRTEPSVHQRMYLFLSMLALTDLGLTLTTLPTVMQLLWFNVRRISSEAC--FAQFFFLHGFSFMESSVLLAMSVDCYVAICCPLHYASILTNEVIGRTGLAIICCCVLAVLPSLFLLKRLPFCHSHLLSRSYCLHQDMIRLVCADIRLNSWYGFALALLIIIVDPLLIVI-----SYTLILKNILGTATWAERLRAL-------NNCLSHILAVLVL-YIPMVGVSMTHRFAKHASPLVHVIMANIYLLAPPVMNPIIYSVKNKQIQWGMLNFLSLKNMHSR |
2YCW Chain:A ((26-283)) | ----------------------------------------VAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIET--LCVIAIDRYLAITSPFRYQSLMT-----RARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDP---GCCDFVTNRAYAIASSIISFYI-PLLIMIFVALRVYREAKEQIRKIDRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYCRSPDFRKAFKRLLAF------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -235936 for 1740 contacts (-135.6/contact) +
2D Compatibility (PS) -24589 + (NN) -6425 + (LL) 4444
1D Compatibility (HY) -19200 + (ID) 3150
Total energy: -284856.0 ( -163.71 by residue)
QMean score : 0.138
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