Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQVTNTTQEGIYFILTDIPGFEASHIWISIPVCCLYTISIMGNTTILTVIRTEPSVHQRMYLFLSMLALTDLGLTLTTLPTVMQLLWFNVRRISSEAC--FAQFFFLHGFSFMESSVLLAMSVDCYVAICCPLHYASILTNEVIGRTGLAIICCCVLAVLPSLFLLKRLPFCHSHLLSRSYCLHQDMIRLVCADIRLNSWYGFALALLIIIVDPLLIVI-----SYTLILKNILGTATWAERLRAL-------NNCLSHILAVLVL-YIPMVGVSMTHRFAKHASPLVHVIMANIYLLAPPVMNPIIYSVKNKQIQWGMLNFLSLKNMHSR
2YCW Chain:A ((26-283))----------------------------------------VAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIET--LCVIAIDRYLAITSPFRYQSLMT-----RARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDP---GCCDFVTNRAYAIASSIISFYI-PLLIMIFVALRVYREAKEQIRKIDRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYCRSPDFRKAFKRLLAF-------


General information:
TITO was launched using:
RESULT:

Template: 2YCW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -235936 for 1740 contacts (-135.6/contact) +
2D Compatibility (PS) -24589 + (NN) -6425 + (LL) 4444
1D Compatibility (HY) -19200 + (ID) 3150
Total energy: -284856.0 ( -163.71 by residue)
QMean score : 0.138

(partial model without unconserved sides chains):
PDB file : Tito_2YCW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YCW-query.scw
PDB file : Tito_Scwrl_2YCW.pdb: