Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSINDTHFYPPFFLLLGIPGLDTLHIWISFPFCIVYLIAIVGNMTILFVIKTEHSLHQPMFYFLAMLSMIDLGLSTSTIPKMLGIFWFNLQEISFG------GCLLQMFFIHMFTGMETVLLVVMAYDRFVAICNPLQYTMILTN-KTISILASVVVGRNLVLVTPFVFLILRLPFCGHNIVPHTYCEHRGLAGLAC---APIKINIIYGLMVISYIIVDVILIASSYVLILRAVFR---------LPSQDVR---LKAFNTCGSHVCV----MLCFYTPAFFSFMTHRFGQNIPH------YIHILLANLYVVVPPALNPVIYGVRTKQIREQIVKIFVQKE |
| 3REY Chain:A ((16-302)) | -----------------------------------IAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIPFAI--------TISTGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTP----MLGWNNCGQP--------GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTF-FCPDCSHAPLWLMYLAIVLAHTNSVV----NPFIYAYRIREFRQTFRKIIRS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3REY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -265005 for 1846 contacts (-143.6/contact) +
2D Compatibility (PS) -24795 + (NN) -4511 + (LL) 4300
1D Compatibility (HY) -27200 + (ID) 3500
Total energy: -320711.0 ( -173.73 by residue)
QMean score : 0.257
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