Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDGDNQSENSQFLLLGISESPEQQRILFWMFLSMYLVTVLGNVLIILAISSDSHLHTPMYFFLANLSFTDLFFVTNTIPKMLVNFQSQNKAISYAGCLTQLYFLVSLVTLDNLILAVMAYDRYVATCCPLHYVTAMSPGLCVLLLSLCWGLSVLYGLLLTFLL--------TRVTFCGPREIHYLFCDMYILLWLACSNTHIIHTALIATGCFIFLTPLGFMTTSYVRIV----RTILQMPS----ASKKYKTFSTCASHLGVVSLFYGTLAMVYLQPLH-----TYSMKDSVA--------TVMYAVLTPMMNPFIYRLRNKDMHGAPGRVLWRPFQRPK |
| 3REY Chain:A ((14-294)) | -------------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIPFAIT--ISTGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIG--LTPMLGWNNCGQP----GCGEGQVACLFEDVVPM-------NYMVYFNFFAC----VLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWL-PLHIINCFTFFCPDCSHAPLWLMYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3REY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -259927 for 1850 contacts (-140.5/contact) +
2D Compatibility (PS) -23987 + (NN) -1623 + (LL) 3716
1D Compatibility (HY) -24000 + (ID) 3500
Total energy: -309321.0 ( -167.20 by residue)
QMean score : 0.257
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