Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIIYKQGITFLQKENNNTIHLNTMFFLSPAETHQRMAAENHSFVTKFILVGLTEKSELQLPLFLVFLGIYVVTVLGNLGMITLIGLSSHLHTPMYCFLSSLSFIDFCHSTVIT-PKMLVNFVTEKNIISYPECMTQLYFFLVFAIAECHMLAAMAYDGYVAICSPLLYSIIISNKACFSLILVVYVIGLICASAHIGCMFRVQF---------CKFDVINHYFCDLISILKLSCSSTYINELLILIFSGINILVPSLTILSSYIFIIASILRIRYTEGR-SKAFSTCSSHISAVSVFFGSAAFMYLQPSSVSSM--DQGKVSSVF-YTIVVPML--------NPLIYSLRNKDVHVALKKTLGKRTFL |
| 4WW3 Chain:A ((54-322)) | --------------------------------------------------------------------------------------TKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWA---IGPIFGWGAYTLEGVLCNCSFDYISRDSTTRSNILCMFILG-FFGPILIIFFCYFNIV---MSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTC |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WW3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183546 for 1756 contacts (-104.5/contact) +
2D Compatibility (PS) -24710 + (NN) 792 + (LL) 7884
1D Compatibility (HY) -20400 + (ID) 3050
Total energy: -223030.0 ( -127.01 by residue)
QMean score : 0.163
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