Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLGRCFPPDTKEKQQLRMTKLCDPAESELSPFLITLILAVLLAEYLIGIIANGFIMAIHAAEWVQNKAVSTSGRILVF-LSVSRIALQSLMMLEITISSTSLSFYSEDAV--------YYAFKISFIFLNFCSLWFAAWLSFFYFVKIANFSYPLFLKLRWRITGLIPWLLWLSVFIS---FSHSMFCINICTVYCNNSFPIHSSNSTKKTYLSEINVVGLAFFFNLGIVTPLIMFILTATLLILSLKRHTLHMGSNATGSNDPSMEAHMGAIKAISYFLILYIFNAVALFIYLSNMFDINSLWNNLCQIIMAAYPASHSILLIQDNPGLRRAWKRLQLRLHLYPKEWTL |
| 4DJH Chain:A ((18-225)) | -----------------------------SPAIPVIITAVYSVVFVVGLVGNSLVMFV----IIRYTKMKTATNIYIFNLALADALVTTTMPFQSTVYLMN-SWPFGDVLCKIVLSIDYYNMFTSIFTLTMMSV--DRYIAVCHPVKALDFRTP----LKAKIINICIWLLSSSVGISAIVLGGTKVREDVDVIECSLQFP--DDDYSWWDLFMKICVFIFAF------VIPVLIIIVCYTLMILRLKSVRLLSGNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DJH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126251 for 1212 contacts (-104.2/contact) +
2D Compatibility (PS) -20701 + (NN) -10376 + (LL) 3872
1D Compatibility (HY) -21600 + (ID) 2600
Total energy: -177656.0 ( -146.58 by residue)
QMean score : 0.146
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