Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATVNTDATDKDISKFKVTFTLVVSGIECITGILGSGFITAIYGAEWARGKTLPTGDRIMLMLSFSRLLLQIWMMLENIFSLLFRIVYNQNSVYILFKVITVFLNHSNLWFAAWLKVFYCLRIANFNHPLFFLMKRKIIVLMPWLLRLSVLVSLSFSFPLSR-DVFNVYVNSSIPIPSS-----NSTEKKYFSETNMVNLVF-FYNMGIFVPLIMFILAATLLILSLKRHTLHMGSNAT----------------------------------------------------------------------------------------------------------------------------------------------------GSRDPSMKAHIGAIKATSYFLILYIFNAIALFLS-TSNIF---DTYSSWNILCKIIMAAYPAGHSVQLILGNPGLRRAWKRFQHQVPLYLKGQTL |
| 2RH1 Chain:A ((36-477)) | -------------DEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFE---RLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAIT---SPFKYQ-SLLTKNKARVIILMVWIVSGLTSFLPIQMHWY-R-----ATHQEAINCYAEETCCD---FFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCL---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RH1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201346 for 2123 contacts (-94.8/contact) +
2D Compatibility (PS) -28743 + (NN) -7599 + (LL) 2232
1D Compatibility (HY) -18800 + (ID) 1550
Total energy: -255806.0 ( -120.49 by residue)
QMean score : 0.239
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